PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Itr_sc000179.1_g00019.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 139aa    MW: 15949 Da    PI: 10.4909
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Itr_sc000179.1_g00019.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544e-171867255
                      AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              y+G+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  Itr_sc000179.1_g00019.1 18 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 67
                             69*****99.**********9...336*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.9041875IPR001471AP2/ERF domain
SMARTSM003802.6E-361881IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-211876IPR016177DNA-binding domain
PRINTSPR003671.3E-111930IPR001471AP2/ERF domain
PfamPF008471.2E-101967IPR001471AP2/ERF domain
CDDcd000183.40E-251976No hitNo description
Gene3DG3DSA:3.30.730.102.1E-291976IPR001471AP2/ERF domain
PRINTSPR003671.3E-115777IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MEEAAEKRKR RQSQAEKPYR GIRMRKWGKW VAEIREPNKR SRIWLGSYSS PVAAARAYDT  60
AVFYLRGPTA RLNFPEFFAH DDRLPDLSAA DIRKKATEVG ARVDALQTAI HAPPKPDRNP  120
AQTRLKPDLN QYPSSDEDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-151775463ATERF1
3gcc_A8e-151775463ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006354856.12e-69PREDICTED: ethylene-responsive transcription factor ERF010-like
SwissprotQ9FH942e-48ERF10_ARATH; Ethylene-responsive transcription factor ERF010
TrEMBLM1ADM53e-69M1ADM5_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000205257e-69(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9432390
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.11e-49DREB and EAR motif protein 2